IL_7A5G_079

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

7A5G|1|A6|A|1482

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5G_079 not in the Motif Atlas

Homologous match to IL_4LFB_035

Geometric discrepancy: 0.2476

The information below is about IL_4LFB_035

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

7A5G|1|A6|G|1179
7A5G|1|A6|G|1180
*
7A5G|1|A6|U|1481
7A5G|1|A6|A|1482
7A5G|1|A6|C|1483

Current chains

Chain A6

12S rRNA

Nearby chains

Chain D6

28S ribosomal protein S5, mitochondrial

Chain d6

Aurora kinase A-interacting protein