IL_7A5G_097

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

ACUU*AUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5G_097 not in the Motif Atlas

Geometric match to IL_5TBW_128

Geometric discrepancy: 0.1463

The information below is about IL_5TBW_128

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67085.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

55

Unit IDs

7A5G|1|A6|A|1511
7A5G|1|A6|C|1512
7A5G|1|A6|U|1513
7A5G|1|A6|U|1514
*
7A5G|1|A6|A|1544
7A5G|1|A6|U|1545
7A5G|1|A6|U|1546
7A5G|1|A6|U|1547

Current chains

Chain A6

12S rRNA

Nearby chains

Chain L3

39S ribosomal protein L14, mitochondrial

Chain a6

28S ribosomal protein S34, mitochondrial

Chain d6

Aurora kinase A-interacting protein