IL_7A5G_116

3D structure

PDB id

7A5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.33 Å

Loop

Sequence

CAAG*UAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5G_116 not in the Motif Atlas

Geometric match to IL_4PDQ_003

Geometric discrepancy: 0.3857

The information below is about IL_4PDQ_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_41344.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7A5G|1|A6|C|1504
7A5G|1|A6|A|1505
7A5G|1|A6|A|1506
7A5G|1|A6|G|1507
*
7A5G|1|A6|U|1551
7A5G|1|A6|A|1552
7A5G|1|A6|G|1553

Current chains

Chain A6

12S rRNA

Nearby chains

Chain A3

Large subunit ribosomal RNA; LSU rRNA

Chain d6

Aurora kinase A-interacting protein