3D structure

PDB id
7A5H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GGAACUCGG*CUGUC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7A5H_057 not in the Motif Atlas
Homologous match to IL_5J7L_386
Geometric discrepancy: 0.0728
The information below is about IL_5J7L_386
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_22854.4
Basepair signature
cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
Number of instances in this motif group
7

Unit IDs

7A5H|1|A|G|2470
7A5H|1|A|G|2471
7A5H|1|A|A|2472
7A5H|1|A|A|2473
7A5H|1|A|C|2474
7A5H|1|A|U|2475
7A5H|1|A|C|2476
7A5H|1|A|G|2477
7A5H|1|A|G|2478
*
7A5H|1|A|C|2653
7A5H|1|A|U|2654
7A5H|1|A|G|2655
7A5H|1|A|U|2656
7A5H|1|A|C|2657

Current chains

Chain A
16S rRNA

Nearby chains

Chain E
39S ribosomal protein L3, mitochondrial
Chain L
39S ribosomal protein L14, mitochondrial
Chain Q
39S ribosomal protein L19, mitochondrial

Coloring options:


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