3D structure

PDB id
7A5I (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the human mitoribosome with A- P-and E-site mt-tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
UCU*AACA
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7A5I_043 not in the Motif Atlas
Geometric match to IL_4P3T_002
Geometric discrepancy: 0.3223
The information below is about IL_4P3T_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_01472.1
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
5

Unit IDs

7A5I|1|A3|U|2953
7A5I|1|A3|C|2954
7A5I|1|A3|U|2955
*
7A5I|1|A3|A|2968
7A5I|1|A3|A|2969
7A5I|1|A3|C|2970
7A5I|1|A3|A|2971

Current chains

Chain A3
16S rRNA

Nearby chains

Chain 43
39S ribosomal protein L36, mitochondrial
Chain N3
39S ribosomal protein L16, mitochondrial
Chain X
Transfer RNA; tRNA
Chain l3
39S ribosomal protein L54, mitochondrial

Coloring options:


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