IL_7A5I_051

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCCUGUAC*GGACAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5I_051 not in the Motif Atlas

Geometric match to IL_7A0S_007

Geometric discrepancy: 0.2727

The information below is about IL_7A0S_007

Detailed Annotation

8x7 Sarcin-Ricin; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_62167.3

Basepair signature

cWW-cWW-tSH-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

20

Unit IDs

7A5I|1|A3|C|3119
7A5I|1|A3|C|3120
7A5I|1|A3|C|3121
7A5I|1|A3|U|3122
7A5I|1|A3|G|3123
7A5I|1|A3|U|3124
7A5I|1|A3|A|3125
7A5I|1|A3|C|3126
*
7A5I|1|A3|G|3131
7A5I|1|A3|G|3132
7A5I|1|A3|A|3133
7A5I|1|A3|C|3134
7A5I|1|A3|A|3135
7A5I|1|A3|A|3136
7A5I|1|A3|G|3137

Current chains

Chain A3

16S rRNA

Nearby chains

Chain L3

39S ribosomal protein L14, mitochondrial