IL_7A5I_060
3D structure
- PDB id
- 7A5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitoribosome with A- P-and E-site mt-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAUCAA*UCAAAACG
- Length
- 14 nucleotides
- Bulged bases
- 7A5I|1|A6|U|762, 7A5I|1|A6|A|786
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A5I_060 not in the Motif Atlas
- Geometric match to IL_4LFB_011
- Geometric discrepancy: 0.1354
- The information below is about IL_4LFB_011
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_46174.4
- Basepair signature
- cWW-cSS-tSS-tSH-L-cWW-tHW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7A5I|1|A6|C|760
7A5I|1|A6|A|761
7A5I|1|A6|U|762
7A5I|1|A6|C|763
7A5I|1|A6|A|764
7A5I|1|A6|A|765
*
7A5I|1|A6|U|783
7A5I|1|A6|C|784
7A5I|1|A6|A|785
7A5I|1|A6|A|786
7A5I|1|A6|A|787
7A5I|1|A6|A|788
7A5I|1|A6|C|789
7A5I|1|A6|G|790
Current chains
- Chain A6
- 12S rRNA
Nearby chains
- Chain J6
- 28S ribosomal protein S12, mitochondrial
- Chain L6
- 28S ribosomal protein S15, mitochondrial
- Chain N6
- 28S ribosomal protein S17, mitochondrial
- Chain d6
- Aurora kinase A-interacting protein
Coloring options: