IL_7A5I_084
3D structure
- PDB id
- 7A5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitoribosome with A- P-and E-site mt-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AUAUAC*GUGU
- Length
- 10 nucleotides
- Bulged bases
- 7A5I|1|A6|U|1263
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A5I_084 not in the Motif Atlas
- Geometric match to IL_4V88_473
- Geometric discrepancy: 0.2969
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
7A5I|1|A6|A|1260
7A5I|1|A6|U|1261
7A5I|1|A6|A|1262
7A5I|1|A6|U|1263
7A5I|1|A6|A|1264
7A5I|1|A6|C|1265
*
7A5I|1|A6|G|1338
7A5I|1|A6|U|1339
7A5I|1|A6|G|1340
7A5I|1|A6|U|1341
Current chains
- Chain A6
- 12S rRNA
Nearby chains
- Chain D6
- 28S ribosomal protein S5, mitochondrial
- Chain H6
- 28S ribosomal protein S10, mitochondrial
- Chain K6
- 28S ribosomal protein S14, mitochondrial
- Chain X
- Transfer RNA; tRNA
- Chain Z6
- 28S ribosomal protein S33, mitochondrial
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