IL_7A5I_112

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UACUU*AUUUA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5I_112 not in the Motif Atlas

Geometric match to IL_8S95_002

Geometric discrepancy: 0.2739

The information below is about IL_8S95_002

Detailed Annotation

Triple non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71154.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

17

Unit IDs

7A5I|1|A6|U|1510
7A5I|1|A6|A|1511
7A5I|1|A6|C|1512
7A5I|1|A6|U|1513
7A5I|1|A6|U|1514
*
7A5I|1|A6|A|1544
7A5I|1|A6|U|1545
7A5I|1|A6|U|1546
7A5I|1|A6|U|1547
7A5I|1|A6|A|1548

Current chains

Chain A6

12S rRNA

Nearby chains

Chain L3

39S ribosomal protein L14, mitochondrial

Chain a6

28S ribosomal protein S34, mitochondrial

Chain d6

Aurora kinase A-interacting protein