IL_7A5J_032
3D structure
- PDB id
- 7A5J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUAAUCACUUG*CCUG
- Length
- 16 nucleotides
- Bulged bases
- 7A5J|1|A|A|2601, 7A5J|1|A|U|2607, 7A5J|1|A|U|2626
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A5J_032 not in the Motif Atlas
- Homologous match to IL_4WF9_077
- Geometric discrepancy: 0.571
- The information below is about IL_4WF9_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84014.3
- Basepair signature
- cWW-L-tHH-cHW-cWW-L-L-tSW-L
- Number of instances in this motif group
- 9
Unit IDs
7A5J|1|A|C|2597
7A5J|1|A|A|2598
7A5J|1|A|U|2599
7A5J|1|A|A|2600
7A5J|1|A|A|2601
7A5J|1|A|U|2602
7A5J|1|A|C|2603
7A5J|1|A|A|2604
7A5J|1|A|C|2605
7A5J|1|A|U|2606
7A5J|1|A|U|2607
7A5J|1|A|G|2608
*
7A5J|1|A|C|2624
7A5J|1|A|C|2625
7A5J|1|A|U|2626
7A5J|1|A|G|2627
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- Transfer RNA; tRNA
Coloring options: