IL_7A5K_032

3D structure

PDB id

7A5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome in the post translocation state bound to mtEF-G1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCAA*UAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5K_032 not in the Motif Atlas

Geometric match to IL_5TBW_091

Geometric discrepancy: 0.2508

The information below is about IL_5TBW_091

Detailed Annotation

Major groove platform with extra pair

Broad Annotation

Major groove platform

Motif group

IL_63450.5

Basepair signature

cWW-cHS-cWW-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7A5K|1|A3|G|2712
7A5K|1|A3|C|2713
7A5K|1|A3|A|2714
7A5K|1|A3|A|2715
*
7A5K|1|A3|U|3104
7A5K|1|A3|A|3105
7A5K|1|A3|C|3106

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 03

39S ribosomal protein L32, mitochondrial

Chain E3

39S ribosomal protein L3, mitochondrial

Chain K3

39S ribosomal protein L13, mitochondrial