IL_7A5K_073

3D structure

PDB id

7A5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome in the post translocation state bound to mtEF-G1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GACCC*GC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5K_073 not in the Motif Atlas

Homologous match to IL_5J7L_036

Geometric discrepancy: 0.2405

The information below is about IL_5J7L_036

Detailed Annotation

Left turn

Broad Annotation

Left turn

Motif group

IL_29346.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

7A5K|1|A6|G|1066
7A5K|1|A6|A|1067
7A5K|1|A6|C|1068
7A5K|1|A6|C|1069
7A5K|1|A6|C|1070
*
7A5K|1|A6|G|1096
7A5K|1|A6|C|1097

Current chains

Chain A6

12S rRNA

Nearby chains

Chain A3

Large subunit ribosomal RNA; LSU rRNA

Chain D3

39S ribosomal protein L2, mitochondrial

Chain I6

28S ribosomal protein S11, mitochondrial