IL_7A5K_077

3D structure

PDB id

7A5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome in the post translocation state bound to mtEF-G1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGG*UACA

Length

7 nucleotides

Bulged bases

7A5K|1|A6|A|1482

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7A5K_077 not in the Motif Atlas

Geometric match to IL_4WF9_018

Geometric discrepancy: 0.3415

The information below is about IL_4WF9_018

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_71625.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

79

Unit IDs

7A5K|1|A6|U|1178
7A5K|1|A6|G|1179
7A5K|1|A6|G|1180
*
7A5K|1|A6|U|1481
7A5K|1|A6|A|1482
7A5K|1|A6|C|1483
7A5K|1|A6|A|1484

Current chains

Chain A6

12S rRNA

Nearby chains

Chain 8

Large subunit ribosomal RNA; LSU rRNA

Chain D6

28S ribosomal protein S5, mitochondrial

Chain d6

Aurora kinase A-interacting protein