IL_7A5K_088
3D structure
- PDB id
- 7A5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitoribosome in the post translocation state bound to mtEF-G1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CC*GCUACAAAG
- Length
- 11 nucleotides
- Bulged bases
- 7A5K|1|A6|C|1297, 7A5K|1|A6|A|1300
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7A5K_088 not in the Motif Atlas
- Geometric match to IL_1R3E_002
- Geometric discrepancy: 0.1604
- The information below is about IL_1R3E_002
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_05670.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 9
Unit IDs
7A5K|1|A6|C|1282
7A5K|1|A6|C|1283
*
7A5K|1|A6|G|1293
7A5K|1|A6|C|1294
7A5K|1|A6|U|1295
7A5K|1|A6|A|1296
7A5K|1|A6|C|1297
7A5K|1|A6|A|1298
7A5K|1|A6|A|1299
7A5K|1|A6|A|1300
7A5K|1|A6|G|1301
Current chains
- Chain A6
- 12S rRNA
Nearby chains
- Chain B6
- 28S ribosomal protein S2, mitochondrial
- Chain D6
- 28S ribosomal protein S5, mitochondrial
- Chain G6
- 28S ribosomal protein S9, mitochondrial
- Chain Q6
- 28S ribosomal protein S21, mitochondrial
- Chain S6
- 28S ribosomal protein S23, mitochondrial
- Chain c6
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
Coloring options: