IL_7ABZ_084

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

AUGUGUAGGAUAG*CUUU

Length

17 nucleotides

Bulged bases

7ABZ|1|1|U|2111, 7ABZ|1|1|U|2118, 7ABZ|1|1|A|2119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ABZ|1|1|A|2108
7ABZ|1|1|U|2109
7ABZ|1|1|G|2110
7ABZ|1|1|U|2111
7ABZ|1|1|G|2112
7ABZ|1|1|U|2113
7ABZ|1|1|A|2114
7ABZ|1|1|G|2115
7ABZ|1|1|G|2116
7ABZ|1|1|A|2117
7ABZ|1|1|U|2118
7ABZ|1|1|A|2119
7ABZ|1|1|G|2120
*
7ABZ|1|1|C|2179
7ABZ|1|1|U|2180
7ABZ|1|1|U|2181
7ABZ|1|1|U|2182

Current chains

Chain 1

23S ribosomal RNA

Nearby chains