IL_7ABZ_086

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

GGCUUUGAAGUGU*GCAUGGAGCC

Length

23 nucleotides

Bulged bases

7ABZ|1|1|U|2132, 7ABZ|1|1|A|2135

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ABZ|1|1|G|2127
7ABZ|1|1|G|2128
7ABZ|1|1|C|2129
7ABZ|1|1|U|2130
7ABZ|1|1|U|2131
7ABZ|1|1|U|2132
7ABZ|1|1|G|2133
7ABZ|1|1|A|2134
7ABZ|1|1|A|2135
7ABZ|1|1|G|2136
7ABZ|1|1|U|2137
7ABZ|1|1|G|2138
7ABZ|1|1|U|2139
*
7ABZ|1|1|G|2152
7ABZ|1|1|C|2153
7ABZ|1|1|A|2154
7ABZ|1|1|U|2155
7ABZ|1|1|G|2156
7ABZ|1|1|G|2157
7ABZ|1|1|A|2158
7ABZ|1|1|G|2159
7ABZ|1|1|C|2160
7ABZ|1|1|C|2161

Current chains

Chain 1

23S ribosomal RNA

Nearby chains