IL_7ABZ_130

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

AUGAAGAAG*UGUAAAGU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ABZ|1|2|A|408
7ABZ|1|2|U|409
7ABZ|1|2|G|410
7ABZ|1|2|A|411
7ABZ|1|2|A|412
7ABZ|1|2|G|413
7ABZ|1|2|A|414
7ABZ|1|2|A|415
7ABZ|1|2|G|416
*
7ABZ|1|2|U|427
7ABZ|1|2|G|428
7ABZ|1|2|U|429
7ABZ|1|2|A|430
7ABZ|1|2|A|431
7ABZ|1|2|A|432
7ABZ|1|2|G|433
7ABZ|1|2|U|434

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 4

Transfer-messenger RNA; tmRNA; 10Sa RNA; SsrA

Chain i

30S ribosomal protein S4