IL_7ABZ_168

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

AUACAAAG*CAUAAAGU

Length

16 nucleotides

Bulged bases

7ABZ|1|2|U|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ABZ|1|2|A|1246
7ABZ|1|2|U|1247
7ABZ|1|2|A|1248
7ABZ|1|2|C|1249
7ABZ|1|2|A|1250
7ABZ|1|2|A|1251
7ABZ|1|2|A|1252
7ABZ|1|2|G|1253
*
7ABZ|1|2|C|1284
7ABZ|1|2|A|1285
7ABZ|1|2|U|1286
7ABZ|1|2|A|1287
7ABZ|1|2|A|1288
7ABZ|1|2|A|1289
7ABZ|1|2|G|1290
7ABZ|1|2|U|1291

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S7

Chain n

30S ribosomal protein S9

Chain o

30S ribosomal protein S10

Chain s

30S ribosomal protein S14