IL_7ABZ_214
3D structure
- PDB id
- 7ABZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.21 Å
Loop
- Sequence
- GGGAUUUGCGAAACCCAAGG*CGAGGAUGUAGGAAUUUC
- Length
- 38 nucleotides
- Bulged bases
- 7ABZ|1|4|A|39, 7ABZ|1|4|G|321, 7ABZ|1|4|U|322
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ABZ|1|4|G|22
7ABZ|1|4|G|23
7ABZ|1|4|G|24
7ABZ|1|4|A|25
7ABZ|1|4|U|26
7ABZ|1|4|U|27
7ABZ|1|4|U|28
7ABZ|1|4|G|29
7ABZ|1|4|C|30
7ABZ|1|4|G|31
7ABZ|1|4|A|32
7ABZ|1|4|A|33
7ABZ|1|4|A|34
7ABZ|1|4|C|35
7ABZ|1|4|C|36
7ABZ|1|4|C|37
7ABZ|1|4|A|38
7ABZ|1|4|A|39
7ABZ|1|4|G|40
7ABZ|1|4|G|41
*
7ABZ|1|4|C|314
7ABZ|1|4|G|315
7ABZ|1|4|A|316
7ABZ|1|4|G|317
7ABZ|1|4|G|318
7ABZ|1|4|A|319
7ABZ|1|4|U|320
7ABZ|1|4|G|321
7ABZ|1|4|U|322
7ABZ|1|4|A|323
7ABZ|1|4|G|324
7ABZ|1|4|G|325
7ABZ|1|4|A|326
7ABZ|1|4|A|327
7ABZ|1|4|U|328
7ABZ|1|4|U|329
7ABZ|1|4|U|330
7ABZ|1|4|C|331
Current chains
- Chain 4
- transfer-messenger RNA (tmRNA)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- SsrA-binding protein
- Chain x
- 30S ribosomal protein S19
Coloring options: