IL_7AC7_068

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

UGAGGU*AUGGAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AC7_068 not in the Motif Atlas

Geometric match to IL_7A0S_018

Geometric discrepancy: 0.3207

The information below is about IL_7A0S_018

Detailed Annotation

Triple sheared with non-canonical cWW

Broad Annotation

Triple sheared

Motif group

IL_57885.1

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

7AC7|1|1|U|1720
7AC7|1|1|G|1721
7AC7|1|1|A|1722
7AC7|1|1|G|1723
7AC7|1|1|G|1724
7AC7|1|1|U|1725
*
7AC7|1|1|A|1735
7AC7|1|1|U|1736
7AC7|1|1|G|1737
7AC7|1|1|G|1738
7AC7|1|1|A|1739
7AC7|1|1|G|1740

Current chains

Chain 1

23S ribosomal RNA

Nearby chains