IL_7AC7_141

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AC7_141 not in the Motif Atlas

Geometric match to IL_5J7L_023

Geometric discrepancy: 0.1485

The information below is about IL_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70801.1

Basepair signature

cWW-cWW-L-R-tWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

7AC7|1|2|G|450
7AC7|1|2|A|451
7AC7|1|2|A|452
7AC7|1|2|G|453
7AC7|1|2|G|454
7AC7|1|2|G|455
*
7AC7|1|2|C|477
7AC7|1|2|A|478
7AC7|1|2|U|479
7AC7|1|2|U|480
7AC7|1|2|G|481
7AC7|1|2|A|482
7AC7|1|2|C|483

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain u

30S ribosomal protein S16