3D structure

PDB id
7ACJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GUAAG*UAUC
Length
9 nucleotides
Bulged bases
7ACJ|1|1|A|1205
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ACJ_042 not in the Motif Atlas
Homologous match to IL_5J7L_287
Geometric discrepancy: 0.1427
The information below is about IL_5J7L_287
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_91920.1
Basepair signature
cWW-cWW-tHH-cWW
Number of instances in this motif group
1

Unit IDs

7ACJ|1|1|G|1202
7ACJ|1|1|U|1203
7ACJ|1|1|A|1204
7ACJ|1|1|A|1205
7ACJ|1|1|G|1206
*
7ACJ|1|1|U|1240
7ACJ|1|1|A|1241
7ACJ|1|1|U|1242
7ACJ|1|1|C|1243

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L4
Chain L
50S ribosomal protein L15

Coloring options:


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