IL_7ACJ_055

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAAGC*GUGAUG

Length

11 nucleotides

Bulged bases

7ACJ|1|1|U|1523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACJ_055 not in the Motif Atlas

Geometric match to IL_3BNN_006

Geometric discrepancy: 0.3129

The information below is about IL_3BNN_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25186.4

Basepair signature

cWW-L-R-L-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

7ACJ|1|1|U|1468
7ACJ|1|1|A|1469
7ACJ|1|1|A|1470
7ACJ|1|1|G|1471
7ACJ|1|1|C|1472
*
7ACJ|1|1|G|1519
7ACJ|1|1|U|1520
7ACJ|1|1|G|1521
7ACJ|1|1|A|1522
7ACJ|1|1|U|1523
7ACJ|1|1|G|1524

Current chains

Chain 1

23S ribosomal RNA

Nearby chains