IL_7ACJ_074

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GC*GCAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACJ_074 not in the Motif Atlas

Geometric match to IL_7A0S_071

Geometric discrepancy: 0.1251

The information below is about IL_7A0S_071

Detailed Annotation

Bulged stacked bases

Broad Annotation

Bulged stacked bases

Motif group

IL_24886.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

12

Unit IDs

7ACJ|1|1|G|1933
7ACJ|1|1|C|1934
*
7ACJ|1|1|G|1964
7ACJ|1|1|C|1965
7ACJ|1|1|A|1966
7ACJ|1|1|C|1967

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 4

Transfer-messenger RNA; tmRNA