IL_7ACJ_077

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

7ACJ|1|1|C|2055, 7ACJ|1|1|U|2613

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACJ_077 not in the Motif Atlas

Homologous match to IL_4WF9_079

Geometric discrepancy: 0.1926

The information below is about IL_4WF9_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83389.2

Basepair signature

cWW-cWW

Number of instances in this motif group

5

Unit IDs

7ACJ|1|1|A|2054
7ACJ|1|1|C|2055
7ACJ|1|1|G|2056
*
7ACJ|1|1|C|2612
7ACJ|1|1|U|2613
7ACJ|1|1|A|2614
7ACJ|1|1|U|2615

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L3

Chain S

50S ribosomal protein L22

Chain b

50S ribosomal protein L32