IL_7ACJ_084

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGCUUUGAAGUGUGGAC*GUCUGCAUGGAGCC

Length

31 nucleotides

Bulged bases

7ACJ|1|1|U|2131, 7ACJ|1|1|U|2132, 7ACJ|1|1|U|2139, 7ACJ|1|1|U|2155

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ACJ|1|1|G|2127
7ACJ|1|1|G|2128
7ACJ|1|1|C|2129
7ACJ|1|1|U|2130
7ACJ|1|1|U|2131
7ACJ|1|1|U|2132
7ACJ|1|1|G|2133
7ACJ|1|1|A|2134
7ACJ|1|1|A|2135
7ACJ|1|1|G|2136
7ACJ|1|1|U|2137
7ACJ|1|1|G|2138
7ACJ|1|1|U|2139
7ACJ|1|1|G|2140
7ACJ|1|1|G|2141
7ACJ|1|1|A|2142
7ACJ|1|1|C|2143
*
7ACJ|1|1|G|2148
7ACJ|1|1|U|2149
7ACJ|1|1|C|2150
7ACJ|1|1|U|2151
7ACJ|1|1|G|2152
7ACJ|1|1|C|2153
7ACJ|1|1|A|2154
7ACJ|1|1|U|2155
7ACJ|1|1|G|2156
7ACJ|1|1|G|2157
7ACJ|1|1|A|2158
7ACJ|1|1|G|2159
7ACJ|1|1|C|2160
7ACJ|1|1|C|2161

Current chains

Chain 1

23S ribosomal RNA

Nearby chains