3D structure

PDB id
7ACR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.44 Å

Loop

Sequence
CUAAG*CGAAG
Length
10 nucleotides
Bulged bases
7ACR|1|1|A|1156
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7ACR_033 not in the Motif Atlas
Homologous match to IL_7A0S_033
Geometric discrepancy: 0.1394
The information below is about IL_7A0S_033
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_08938.1
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
22

Unit IDs

7ACR|1|1|C|998
7ACR|1|1|U|999
7ACR|1|1|A|1000
7ACR|1|1|A|1001
7ACR|1|1|G|1002
*
7ACR|1|1|C|1153
7ACR|1|1|G|1154
7ACR|1|1|A|1155
7ACR|1|1|A|1156
7ACR|1|1|G|1157

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.281 s