IL_7ACR_085

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

GUUC*GGC

Length

7 nucleotides

Bulged bases

7ACR|1|1|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACR_085 not in the Motif Atlas

Geometric match to IL_1U6B_001

Geometric discrepancy: 0.2578

The information below is about IL_1U6B_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_42997.4

Basepair signature

cWW-cWS-cWW

Number of instances in this motif group

21

Unit IDs

7ACR|1|1|G|2400
7ACR|1|1|U|2401
7ACR|1|1|U|2402
7ACR|1|1|C|2403
*
7ACR|1|1|G|2414
7ACR|1|1|G|2415
7ACR|1|1|C|2416

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain c

50S ribosomal protein L33

Chain e

50S ribosomal protein L35