IL_7ACR_118

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7ACR|1|2|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACR_118 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.2036

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7ACR|1|2|G|147
7ACR|1|2|G|148
7ACR|1|2|A|149
7ACR|1|2|U|150
7ACR|1|2|A|151
7ACR|1|2|A|152
7ACR|1|2|C|153
*
7ACR|1|2|G|168
7ACR|1|2|C|169
7ACR|1|2|U|170
7ACR|1|2|A|171
7ACR|1|2|A|172
7ACR|1|2|U|173
7ACR|1|2|A|174
7ACR|1|2|C|175

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S20