IL_7ACR_146

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

GCA*UUCCC

Length

8 nucleotides

Bulged bases

7ACR|1|2|C|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ACR_146 not in the Motif Atlas

Homologous match to IL_4LFB_037

Geometric discrepancy: 0.1248

The information below is about IL_4LFB_037

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_61370.1

Basepair signature

cWW-cWS-L-cWW-L

Number of instances in this motif group

4

Unit IDs

7ACR|1|2|G|933
7ACR|1|2|C|934
7ACR|1|2|A|935
*
7ACR|1|2|U|1380
7ACR|1|2|U|1381
7ACR|1|2|C|1382
7ACR|1|2|C|1383
7ACR|1|2|C|1384

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 5

SsrA-binding protein

Chain l

30S ribosomal protein S7

Chain n

30S ribosomal protein S9