IL_7AF5_007
3D structure
- PDB id
- 7AF5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacterial 30S ribosomal subunit assembly complex state I (head domain)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GCU*G(2MG)C
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AF5_007 not in the Motif Atlas
- Geometric match to IL_4WF9_042
- Geometric discrepancy: 0.1647
- The information below is about IL_4WF9_042
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7AF5|1|1|G|1050
7AF5|1|1|C|1051
7AF5|1|1|U|1052
*
7AF5|1|1|G|1206
7AF5|1|1|2MG|1207
7AF5|1|1|C|1208
Current chains
- Chain 1
- 16SrRNA (head domain of the 30S ribosome)
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain N
- 30S ribosomal protein S14
Coloring options: