IL_7AF8_018

3D structure

PDB id

7AF8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state E (head domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

UCC*GAGA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AF8_018 not in the Motif Atlas

Geometric match to IL_4P3T_002

Geometric discrepancy: 0.3308

The information below is about IL_4P3T_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01472.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

5

Unit IDs

7AF8|1|1|U|997
7AF8|1|1|C|998
7AF8|1|1|C|999
*
7AF8|1|1|G|1041
7AF8|1|1|A|1042
7AF8|1|1|G|1043
7AF8|1|1|A|1044

Current chains

Chain 1

16SrRNA (head domain of the 30S ribosome

Nearby chains