IL_7AFK_018

3D structure

PDB id

7AFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state D (head domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.9 Å

Loop

Sequence

CGGAUUG*CAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AFK|1|1|C|1303
7AFK|1|1|G|1304
7AFK|1|1|G|1305
7AFK|1|1|A|1306
7AFK|1|1|U|1307
7AFK|1|1|U|1308
7AFK|1|1|G|1309
*
7AFK|1|1|C|1328
7AFK|1|1|A|1329
7AFK|1|1|U|1330
7AFK|1|1|G|1331
7AFK|1|1|A|1332
7AFK|1|1|A|1333
7AFK|1|1|G|1334

Current chains

Chain 1

16SrRNA (head domain of the 30S ribosome)

Nearby chains

Chain M

30S ribosomal protein S13