IL_7AFL_021

3D structure

PDB id

7AFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state D (multibody refinement for body domain of 30S ribosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CAG*CAGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AFL_021 not in the Motif Atlas

Homologous match to IL_5J7L_021

Geometric discrepancy: 0.211

The information below is about IL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_33323.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7AFL|1|A|C|440
7AFL|1|A|A|441
7AFL|1|A|G|442
*
7AFL|1|A|C|492
7AFL|1|A|A|493
7AFL|1|A|G|494
7AFL|1|A|A|495
7AFL|1|A|A|496
7AFL|1|A|G|497

Current chains

Chain A

16SrRNA

Nearby chains

Chain D

30S ribosomal protein S4