IL_7AFO_035
3D structure
- PDB id
- 7AFO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacterial 30S ribosomal subunit assembly complex state B (body domain)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.93 Å
Loop
- Sequence
- AGAAUU*AGGAAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AFO_035 not in the Motif Atlas
- Homologous match to IL_4LFB_030
- Geometric discrepancy: 0.1341
- The information below is about IL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
7AFO|1|A|A|673
7AFO|1|A|G|674
7AFO|1|A|A|675
7AFO|1|A|A|676
7AFO|1|A|U|677
7AFO|1|A|U|678
*
7AFO|1|A|A|712
7AFO|1|A|G|713
7AFO|1|A|G|714
7AFO|1|A|A|715
7AFO|1|A|A|716
7AFO|1|A|U|717
Current chains
- Chain A
- 16SrRNA (body domain of the 30S ribosome)
Nearby chains
- Chain F
- 30S ribosomal protein S6
- Chain K
- 30S ribosomal protein S11
- Chain R
- 30S ribosomal protein S18
- Chain U
- 30S ribosomal protein S21
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