IL_7AJT_040

3D structure

PDB id

7AJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Pre-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GGGA*UCGAUUC

Length

11 nucleotides

Bulged bases

7AJT|1|D3|A|378, 7AJT|1|D3|U|379, 7AJT|1|D3|U|380

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJT|1|D3|G|363
7AJT|1|D3|G|364
7AJT|1|D3|G|365
7AJT|1|D3|A|366
*
7AJT|1|D3|U|375
7AJT|1|D3|C|376
7AJT|1|D3|G|377
7AJT|1|D3|A|378
7AJT|1|D3|U|379
7AJT|1|D3|U|380
7AJT|1|D3|C|381

Current chains

Chain D3

18S rRNA

Nearby chains

Chain CL

Ribosome biogenesis protein BMS1

Chain DE

40S ribosomal protein S4-A

Chain DJ

40S ribosomal protein S9-A