IL_7AJT_045

3D structure

PDB id

7AJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Pre-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

AUACAGG*CUUGUAAU

Length

15 nucleotides

Bulged bases

7AJT|1|D3|A|505

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJT|1|D3|A|481
7AJT|1|D3|U|482
7AJT|1|D3|A|483
7AJT|1|D3|C|484
7AJT|1|D3|A|485
7AJT|1|D3|G|486
7AJT|1|D3|G|487
*
7AJT|1|D3|C|500
7AJT|1|D3|U|501
7AJT|1|D3|U|502
7AJT|1|D3|G|503
7AJT|1|D3|U|504
7AJT|1|D3|A|505
7AJT|1|D3|A|506
7AJT|1|D3|U|507

Current chains

Chain D3

18S rRNA

Nearby chains

Chain CA

rRNA 2'-O-methyltransferase fibrillarin

Chain CL

Ribosome biogenesis protein BMS1

Chain DJ

40S ribosomal protein S9-A

Chain JM

rRNA-processing protein FCF2

Chain UC

Something about silencing protein 10