IL_7AJT_052

3D structure

PDB id

7AJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Pre-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

UAC*GAAUA

Length

8 nucleotides

Bulged bases

7AJT|1|D3|A|803

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJT|1|D3|U|745
7AJT|1|D3|A|746
7AJT|1|D3|C|747
*
7AJT|1|D3|G|802
7AJT|1|D3|A|803
7AJT|1|D3|A|804
7AJT|1|D3|U|805
7AJT|1|D3|A|806

Current chains

Chain D3

18S rRNA

Nearby chains

Chain DH

40S ribosomal protein S7-A

Chain DL

40S ribosomal protein S11-A

Chain DW

40S ribosomal protein S22-A

Chain UT

U3 small nucleolar RNA-associated protein 20