IL_7AJT_080

3D structure

PDB id

7AJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Pre-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GAGAAG*CAUCUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJT|1|D3|G|1690
7AJT|1|D3|A|1691
7AJT|1|D3|G|1692
7AJT|1|D3|A|1693
7AJT|1|D3|A|1694
7AJT|1|D3|G|1695
*
7AJT|1|D3|C|1706
7AJT|1|D3|A|1707
7AJT|1|D3|U|1708
7AJT|1|D3|C|1709
7AJT|1|D3|U|1710
7AJT|1|D3|C|1711

Current chains

Chain D3

18S rRNA

Nearby chains

Chain UV

U3 small nucleolar RNA-associated protein 22