IL_7AJT_090

3D structure

PDB id

7AJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Pre-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GUUGAAU*AUUCUUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJT|1|D2|G|346
7AJT|1|D2|U|347
7AJT|1|D2|U|348
7AJT|1|D2|G|349
7AJT|1|D2|A|350
7AJT|1|D2|A|351
7AJT|1|D2|U|352
*
7AJT|1|D2|A|372
7AJT|1|D2|U|373
7AJT|1|D2|U|374
7AJT|1|D2|C|375
7AJT|1|D2|U|376
7AJT|1|D2|U|377
7AJT|1|D2|C|378

Current chains

Chain D2

5'ETS RNA

Nearby chains

Chain JN

Protein FAF1

Chain JO

KRR1 small subunit processome component

Chain UG

U3 small nucleolar RNA-associated protein 7

Chain UN

U3 small nucleolar RNA-associated protein 14