IL_7AJU_004
3D structure
- PDB id
- 7AJU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- ACU*ACU
- Length
- 6 nucleotides
- Bulged bases
- 7AJU|1|D2|C|469
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AJU_004 not in the Motif Atlas
- Geometric match to IL_5TBW_004
- Geometric discrepancy: 0.2737
- The information below is about IL_5TBW_004
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_05035.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 38
Unit IDs
7AJU|1|D2|A|468
7AJU|1|D2|C|469
7AJU|1|D2|U|470
*
7AJU|1|D4|A|48
7AJU|1|D4|C|49
7AJU|1|D4|U|50
Current chains
- Chain D2
- 5'ETS RNA
- Chain D4
- U3 snoRNA
Nearby chains
- Chain UG
- U3 small nucleolar RNA-associated protein 7
- Chain UJ
- U3 small nucleolar RNA-associated protein 10
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