IL_7AJU_020
3D structure
- PDB id
- 7AJU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CC*GUG
- Length
- 5 nucleotides
- Bulged bases
- 7AJU|1|D3|U|280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AJU_020 not in the Motif Atlas
- Homologous match to IL_4V88_401
- Geometric discrepancy: 0.2291
- The information below is about IL_4V88_401
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
7AJU|1|D3|C|275
7AJU|1|D3|C|276
*
7AJU|1|D3|G|279
7AJU|1|D3|U|280
7AJU|1|D3|G|281
Current chains
- Chain D3
- 18S rRNA
Nearby chains
- Chain DG
- 40S ribosomal protein S6-A
Coloring options: