IL_7AJU_032
3D structure
- PDB id
- 7AJU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGCAAGUC*GCAGCCGCGGUAAUUCC
- Length
- 25 nucleotides
- Bulged bases
- 7AJU|1|D3|A|556, 7AJU|1|D3|C|572, 7AJU|1|D3|C|573, 7AJU|1|D3|G|574, 7AJU|1|D3|A|579
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7AJU|1|D3|G|552
7AJU|1|D3|G|553
7AJU|1|D3|C|554
7AJU|1|D3|A|555
7AJU|1|D3|A|556
7AJU|1|D3|G|557
7AJU|1|D3|U|558
7AJU|1|D3|C|559
*
7AJU|1|D3|G|568
7AJU|1|D3|C|569
7AJU|1|D3|A|570
7AJU|1|D3|G|571
7AJU|1|D3|C|572
7AJU|1|D3|C|573
7AJU|1|D3|G|574
7AJU|1|D3|C|575
7AJU|1|D3|G|576
7AJU|1|D3|G|577
7AJU|1|D3|U|578
7AJU|1|D3|A|579
7AJU|1|D3|A|580
7AJU|1|D3|U|581
7AJU|1|D3|U|582
7AJU|1|D3|C|583
7AJU|1|D3|C|584
Current chains
- Chain D3
- 18S rRNA
Nearby chains
- Chain CJ
- U3 small nucleolar ribonucleoprotein protein IMP4
- Chain CK
- U3 small nucleolar RNA-associated protein MPP10
- Chain CL
- Ribosome biogenesis protein BMS1
- Chain DX
- 40S ribosomal protein S23-A
- Chain UB
- Nucleolar complex protein 14
- Chain UC
- Something about silencing protein 10
- Chain UK
- U3 small nucleolar RNA-associated protein 11
Coloring options: