3D structure

PDB id
7AJU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GCCGGUC*GGAUUUC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7AJU|1|D3|G|652
7AJU|1|D3|C|653
7AJU|1|D3|C|654
7AJU|1|D3|G|655
7AJU|1|D3|G|656
7AJU|1|D3|U|657
7AJU|1|D3|C|658
*
7AJU|1|D3|G|676
7AJU|1|D3|G|677
7AJU|1|D3|A|678
7AJU|1|D3|U|679
7AJU|1|D3|U|680
7AJU|1|D3|U|681
7AJU|1|D3|C|682

Current chains

Chain D3
18S rRNA

Nearby chains

Chain UT
U3 small nucleolar RNA-associated protein 20

Coloring options:

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