IL_7AJU_038

3D structure

PDB id

7AJU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCCGGUC*GGAUUUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJU|1|D3|G|652
7AJU|1|D3|C|653
7AJU|1|D3|C|654
7AJU|1|D3|G|655
7AJU|1|D3|G|656
7AJU|1|D3|U|657
7AJU|1|D3|C|658
*
7AJU|1|D3|G|676
7AJU|1|D3|G|677
7AJU|1|D3|A|678
7AJU|1|D3|U|679
7AJU|1|D3|U|680
7AJU|1|D3|U|681
7AJU|1|D3|C|682

Current chains

Chain D3

18S rRNA

Nearby chains

Chain UT

U3 small nucleolar RNA-associated protein 20