IL_7AJU_065
3D structure
- PDB id
- 7AJU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UGAG*CAAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AJU_065 not in the Motif Atlas
- Geometric match to IL_1SAQ_002
- Geometric discrepancy: 0.2195
- The information below is about IL_1SAQ_002
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.13
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
7AJU|1|D3|U|1669
7AJU|1|D3|G|1670
7AJU|1|D3|A|1671
7AJU|1|D3|G|1672
*
7AJU|1|D3|C|1729
7AJU|1|D3|A|1730
7AJU|1|D3|A|1731
7AJU|1|D3|A|1732
Current chains
- Chain D3
- 18S rRNA
Nearby chains
- Chain UM
- U3 small nucleolar RNA-associated protein 13
Coloring options: