3D structure

PDB id
7AJU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GGUUGAUG*CUGAC
Length
13 nucleotides
Bulged bases
7AJU|1|D4|U|81
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7AJU|1|D4|G|78
7AJU|1|D4|G|79
7AJU|1|D4|U|80
7AJU|1|D4|U|81
7AJU|1|D4|G|82
7AJU|1|D4|A|83
7AJU|1|D4|U|84
7AJU|1|D4|G|85
*
7AJU|1|D4|C|325
7AJU|1|D4|U|326
7AJU|1|D4|G|327
7AJU|1|D4|A|328
7AJU|1|D4|C|329

Current chains

Chain D4
U3 snoRNA

Nearby chains

Chain CE
Nucleolar protein 58
Chain CF
13 kDa ribonucleoprotein-associated protein
Chain UK
U3 small nucleolar RNA-associated protein 11
Chain UQ
NET1-associated nuclear protein 1
Chain UR
U3 small nucleolar RNA-associated protein 18

Coloring options:

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