IL_7AJU_073

3D structure

PDB id

7AJU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUGAG*CGAUGAUC

Length

13 nucleotides

Bulged bases

7AJU|1|D4|U|255

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJU|1|D4|G|111
7AJU|1|D4|U|112
7AJU|1|D4|G|113
7AJU|1|D4|A|114
7AJU|1|D4|G|115
*
7AJU|1|D4|C|252
7AJU|1|D4|G|253
7AJU|1|D4|A|254
7AJU|1|D4|U|255
7AJU|1|D4|G|256
7AJU|1|D4|A|257
7AJU|1|D4|U|258
7AJU|1|D4|C|259

Current chains

Chain D4

U3 snoRNA

Nearby chains

Chain CD

Nucleolar protein 56

Chain CG

13 kDa ribonucleoprotein-associated protein

Chain CH

Ribosomal RNA-processing protein 9

Chain JM

rRNA-processing protein FCF2