IL_7AJU_078

3D structure

PDB id

7AJU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUAUCAA*UUUCAACGG

Length

16 nucleotides

Bulged bases

7AJU|1|D3|U|313, 7AJU|1|D3|C|351

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJU|1|D3|C|310
7AJU|1|D3|U|311
7AJU|1|D3|A|312
7AJU|1|D3|U|313
7AJU|1|D3|C|314
7AJU|1|D3|A|315
7AJU|1|D3|A|316
*
7AJU|1|D3|U|348
7AJU|1|D3|U|349
7AJU|1|D3|U|350
7AJU|1|D3|C|351
7AJU|1|D3|A|352
7AJU|1|D3|A|353
7AJU|1|D3|C|354
7AJU|1|D3|G|355
7AJU|1|D3|G|356

Current chains

Chain D3

18S rRNA

Nearby chains

Chain CL

Ribosome biogenesis protein BMS1

Chain DI

40S ribosomal protein S8-A

Chain DL

40S ribosomal protein S11-A

Chain DX

40S ribosomal protein S23-A

Chain JD

Probable ATP-dependent RNA helicase DHR1