3D structure

PDB id
7AJU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GGGA*UCGAUUC
Length
11 nucleotides
Bulged bases
7AJU|1|D3|U|380
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7AJU|1|D3|G|363
7AJU|1|D3|G|364
7AJU|1|D3|G|365
7AJU|1|D3|A|366
*
7AJU|1|D3|U|375
7AJU|1|D3|C|376
7AJU|1|D3|G|377
7AJU|1|D3|A|378
7AJU|1|D3|U|379
7AJU|1|D3|U|380
7AJU|1|D3|C|381

Current chains

Chain D3
18S rRNA

Nearby chains

Chain CL
Ribosome biogenesis protein BMS1
Chain DE
40S ribosomal protein S4-A
Chain DJ
40S ribosomal protein S9-A
Chain DX
40S ribosomal protein S23-A

Coloring options:

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