IL_7AJU_079

3D structure

PDB id

7AJU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGA*UCGAUUC

Length

11 nucleotides

Bulged bases

7AJU|1|D3|U|380

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AJU|1|D3|G|363
7AJU|1|D3|G|364
7AJU|1|D3|G|365
7AJU|1|D3|A|366
*
7AJU|1|D3|U|375
7AJU|1|D3|C|376
7AJU|1|D3|G|377
7AJU|1|D3|A|378
7AJU|1|D3|U|379
7AJU|1|D3|U|380
7AJU|1|D3|C|381

Current chains

Chain D3

18S rRNA

Nearby chains

Chain CL

Ribosome biogenesis protein BMS1

Chain DE

40S ribosomal protein S4-A

Chain DJ

40S ribosomal protein S9-A

Chain DX

40S ribosomal protein S23-A