IL_7AJU_086
3D structure
- PDB id
- 7AJU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AUGG*CGU
- Length
- 7 nucleotides
- Bulged bases
- 7AJU|1|D3|G|1118
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AJU_086 not in the Motif Atlas
- Geometric match to IL_5E81_401
- Geometric discrepancy: 0.3597
- The information below is about IL_5E81_401
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 23
Unit IDs
7AJU|1|D3|A|1116
7AJU|1|D3|U|1117
7AJU|1|D3|G|1118
7AJU|1|D3|G|1119
*
7AJU|1|D4|C|6
7AJU|1|D4|G|7
7AJU|1|D4|U|8
Current chains
- Chain D3
- 18S rRNA
- Chain D4
- U3 snoRNA
Nearby chains
- Chain CL
- Ribosome biogenesis protein BMS1
- Chain DX
- 40S ribosomal protein S23-A
- Chain JD
- Probable ATP-dependent RNA helicase DHR1
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